Insertion junction: CLIP2.058443_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.058443
Chromosome:chromosome 6
Location:67819
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g249300 ARP5,ARP4 (1 of 1) K11340 - actin-like protein 6A (ACTL6A, INO80K); Actin-related protein, putative SWR-C component 3'UTR
Cre06.g249350 DMC3,DMT1A (1 of 4) K00558 - DNA (cytosine-5)-methyltransferase 1 (DNMT1, dcm); Putative DNA methylase 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTTGCGTGGATGGCCCGATCCTGCTCTGGGCGAGGGTCGCCATTGCCGCT
Internal bar code:TGAAGCCAATGAAAGTTTCGAG

Confirmation - LEAP-Seq

LEAP-Seq distance:2081
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:13
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:13

Suggested primers for confirmation by PCR

Suggested primer 1:CGCCAAATGAGATGAGCAGC
Suggested primer 2:CACGTTGCTTGAAATGCCCA