Insertion junction: CLIP2.058447_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.058447
Chromosome:chromosome 16
Location:2632631
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g661350 RBCMT1,RMT1 (1 of 1) K00592 - [ribulose-bisphosphate carboxylase]-lysine N-methyltransferase (E2.1.1.127); ribulose-1%252C5 bisphosphate carboxylase oxygenase large subunit N-methyltransferase, putative 3'UTR
Cre16.g661400 (1 of 1) PTHR22979 - ZINC FINGER PROTEIN-RELATED 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGGAATGGCCAGGTCGAAGTCATTGTAGAATGTAGATCAGGATTTCAGAG
Internal bar code:GATTTAGGCGGAACAAGTGGAT

Confirmation - LEAP-Seq

LEAP-Seq distance:1787
LEAP-Seq percent confirming:93.3333
LEAP-Seq n confirming:28
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:30

Suggested primers for confirmation by PCR

Suggested primer 1:GGTGGGCTCTAGCTGTTTGT
Suggested primer 2:TGGACGACGGTAAGTGTGTG