Insertion junction: CLIP2.058455_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.058455
Chromosome:chromosome 2
Location:6700624
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g387282 (1 of 1) PTHR13600//PTHR13600:SF22 - LEUCINE CARBOXYL METHYLTRANSFERASE // S-ADENOSYL-L-METHIONINE-DEPENDENT METHYLTRANSFERASES SUPERFAMILY PROTEIN 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGTTCTAGTTTGGCGTTGCAACGGGTCGGGAGGGATACGGCGGGTGGAAA
Internal bar code:TCGAGGTGGCATTGTCTCACTT

Confirmation - LEAP-Seq

LEAP-Seq distance:1781
LEAP-Seq percent confirming:63.6364
LEAP-Seq n confirming:28
LEAP-Seq n nonconfirming:16
LEAP-Seq n unique pos:44

Suggested primers for confirmation by PCR

Suggested primer 1:TAGCCTTGAAGCAGTCTGCC
Suggested primer 2:TACCAATCCTTGCAACCCCC