Insertion junction: CLIP2.058467_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.058467
Chromosome:chromosome 6
Location:2942120
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g273400 TMC2 putative tRNA (cytosine-5)-methyltransferase 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGGGTGCGGGGCTGGGCAGCCCACAGGCCGGCTGACAGTATCTACAAATG
Internal bar code:GACTTCCTACCAATTCTGCGTA

Confirmation - LEAP-Seq

LEAP-Seq distance:3595
LEAP-Seq percent confirming:98.9796
LEAP-Seq n confirming:97
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:98

Suggested primers for confirmation by PCR

Suggested primer 1:AAACATGTGAACGCCCAAGC
Suggested primer 2:GCTCCTCTAATCCTGGTCGC