Insertion junction: CLIP2.058468_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.058468
Chromosome:chromosome 3
Location:4538732
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g176050 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGTCTTGAACGGCAGTTCTGGCGACTAGCTGACACAACGGCGCCTGTCGG
Internal bar code:TATTGAGGTCGCTCGTAGATCG

Confirmation - LEAP-Seq

LEAP-Seq distance:671
LEAP-Seq percent confirming:54.5455
LEAP-Seq n confirming:18
LEAP-Seq n nonconfirming:15
LEAP-Seq n unique pos:33

Suggested primers for confirmation by PCR

Suggested primer 1:TGCTTTGTGTTTCCCTGGGT
Suggested primer 2:TAGTCACTAGTCGGTGGGGG