Insertion junction: CLIP2.058473_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.058473
Chromosome:chromosome 16
Location:5846944
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g679800 (1 of 2) PTHR17630//PTHR17630:SF43 - DIENELACTONE HYDROLASE // SUBFAMILY NOT NAMED 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCCCGTCAACCGCCCCGCTCGTGGTGTCGTGCGGTATCATCTTATCTATC
Internal bar code:GTTTTAAGCTTAGAGACAATCA

Confirmation - LEAP-Seq

LEAP-Seq distance:1456
LEAP-Seq percent confirming:88.4615
LEAP-Seq n confirming:23
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:26

Suggested primers for confirmation by PCR

Suggested primer 1:ACCAACCTTCCAAACTGCCA
Suggested primer 2:CGCGTCCCGAAATGACATTC