Insertion junction: CLIP2.058475_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.058475
Chromosome:chromosome 3
Location:5073615
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g180100 UNG2 Uracil DNA glycosylase; (1 of 1) 3.2.2.29 - Thymine-DNA glycosylase / Uracil/thymine DNA glycosylase 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCCAAATGTTGATGCGTCTGTGTCGGCTGTTCTGCAGCTCGGAAGGGCA
Internal bar code:AGTTATGTTTGCGTATGATATC

Confirmation - LEAP-Seq

LEAP-Seq distance:2189
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:11
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:ATGAAGTGGATGGCGCAGAT
Suggested primer 2:GCGTATTGGAAAGAGCTGCG