Insertion junction: CLIP2.058479_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.058479
Chromosome:chromosome 12
Location:762846
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre12.g492500 (1 of 39) IPR009003 - Peptidase S1, PA clan CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTACACGAGCCCGCTCTAGGTCATTCGCCATGCTCGCAACGCCCGAAGGC
Internal bar code:GCGAAGCGCTCGGATCATGCTG

Confirmation - LEAP-Seq

LEAP-Seq distance:517
LEAP-Seq percent confirming:92.8571
LEAP-Seq n confirming:26
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:28

Suggested primers for confirmation by PCR

Suggested primer 1:CTCGCTGCAATTCCCGATTG
Suggested primer 2:CACACACACGAGAGCTAGGG