Insertion junction: CLIP2.058489_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.058489
Chromosome:chromosome 12
Location:305336
Confidence (%):40
Locus systematic id Locus common name Defline Feature
Cre12.g485550 (1 of 1) 4.1.3.4 - Hydroxymethylglutaryl-CoA lyase / HMG-CoA lyase CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACGGACTCCCCTCCAGCGTCACTATCTATGAAGTGGGGCCCCGCGACGGG
Internal bar code:TGCCTCTTTAGTTCGACATTTC

Confirmation - LEAP-Seq

LEAP-Seq distance:726
LEAP-Seq percent confirming:77.7778
LEAP-Seq n confirming:7
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:GGGGGAGGGGTTGTAGAGAT
Suggested primer 2:AAGGAATCGCGTGAAGCTCA