Insertion junction: CLIP2.058489_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.058489
Chromosome:chromosome 12
Location:305336
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre12.g485550 (1 of 1) 4.1.3.4 - Hydroxymethylglutaryl-CoA lyase / HMG-CoA lyase CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGGAAGCGTGCTCAGGGAGCGGGCAACGCCGACCGGAGCGGCAAGCCTC
Internal bar code:GCGTTAAATGAGTGATTAGTCG

Confirmation - LEAP-Seq

LEAP-Seq distance:936
LEAP-Seq percent confirming:29.1667
LEAP-Seq n confirming:7
LEAP-Seq n nonconfirming:17
LEAP-Seq n unique pos:24

Suggested primers for confirmation by PCR

Suggested primer 1:AAGGAATCGCGTGAAGCTCA
Suggested primer 2:GGGGGAGGGGTTGTAGAGAT