Insertion junction: CLIP2.058490_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.058490
Chromosome:chromosome 12
Location:2465324
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g507500 (1 of 5) IPR001005//IPR009057//IPR017877 - SANT/Myb domain // Homeodomain-like // Myb-like domain 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGCTAAACGAGCGGCTCCCGGCTCTCAAACCGATTATCGACTGCAAGCT
Internal bar code:CATTGAGGCTGAAGCCTTGTTA

Confirmation - LEAP-Seq

LEAP-Seq distance:1941
LEAP-Seq percent confirming:85.4167
LEAP-Seq n confirming:41
LEAP-Seq n nonconfirming:7
LEAP-Seq n unique pos:48

Suggested primers for confirmation by PCR

Suggested primer 1:TGCCAAGCTCACAGAGACAG
Suggested primer 2:GTATGTGTATGGCCGCCAGA