Insertion junction: CLIP2.058490_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.058490
Chromosome:chromosome 12
Location:2465326
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g507500 (1 of 5) IPR001005//IPR009057//IPR017877 - SANT/Myb domain // Homeodomain-like // Myb-like domain 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGTCTTCAACTGGCGCAGGTCTGTAGGCTCCGCACAGCGAGTGGCAGCC
Internal bar code:CATTGAGGCTGAAGCCTTGTTA

Confirmation - LEAP-Seq

LEAP-Seq distance:1835
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:70
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:70

Suggested primers for confirmation by PCR

Suggested primer 1:GTATGTGTATGGCCGCCAGA
Suggested primer 2:TGCCAAGCTCACAGAGACAG