Insertion junction: CLIP2.058491_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.058491
Chromosome:chromosome 17
Location:1183404
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g704450 (1 of 4) PTHR12298//PTHR12298:SF7 - PCDC2 PROGRAMMED CELL DEATH PROTEIN 2 -RELATED // SUBFAMILY NOT NAMED 3'UTR
Cre17.g704500 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTTATAACGTCGTATGGTTTGACAAGTTAAGAGTTATGCAGTCTTGCACC
Internal bar code:TTAATGAAGTATTGTGTTTGAA

Confirmation - LEAP-Seq

LEAP-Seq distance:1250
LEAP-Seq percent confirming:80.0
LEAP-Seq n confirming:4
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:GGTGCTTGGATGCAGAGAGT
Suggested primer 2:TCTCCTCCTCCTCTTCAGGC