Insertion junction: CLIP2.058491_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.058491
Chromosome:chromosome 17
Location:1186723
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g704450 (1 of 4) PTHR12298//PTHR12298:SF7 - PCDC2 PROGRAMMED CELL DEATH PROTEIN 2 -RELATED // SUBFAMILY NOT NAMED 3'UTR
Cre17.g704500 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCTGTTGTGCTGTCGGCGCGTTGGTCGTTGCGCGGGCGCCTATGCGCCC
Internal bar code:TTAATGAAGTATTGTGTTTGAA

Confirmation - LEAP-Seq

LEAP-Seq distance:644
LEAP-Seq percent confirming:2.32558
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:42
LEAP-Seq n unique pos:43

Suggested primers for confirmation by PCR

Suggested primer 1:TCTCCTCCTCCTCTTCAGGC
Suggested primer 2:GGTGCTTGGATGCAGAGAGT