Insertion junction: CLIP2.058492_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.058492
Chromosome:chromosome 3
Location:2753449
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g161400 MAA7,WSN2 (1 of 1) K01696 - tryptophan synthase beta chain (trpB); Tryptophan synthase beta subunit 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GAGAGCAGAGCGAAGGGCCGCCTTGGTCGCAGTGTGCACTGGGCGTGCTT
Internal bar code:AGCACGGTGCAAGTCAAGGACG

Confirmation - LEAP-Seq

LEAP-Seq distance:1162
LEAP-Seq percent confirming:80.7692
LEAP-Seq n confirming:21
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:26

Suggested primers for confirmation by PCR

Suggested primer 1:CTGTGCCTTAGTGCTCACCA
Suggested primer 2:GTTGGGAGGGTAACGGGAAG