Insertion junction: CLIP2.058503_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.058503
Chromosome:chromosome 6
Location:3013034
Confidence (%):40
Locus systematic id Locus common name Defline Feature
Cre06.g274450 SMM20 (1 of 5) PTHR13271//PTHR13271:SF28 - UNCHARACTERIZED PUTATIVE METHYLTRANSFERASE // SUBFAMILY NOT NAMED; S-adenosyl-L-methionine-dependent methyltransferase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCAAAGACCAACACCACCAAAGTTAAACCCGCAGCCGTCATGGATCAGG
Internal bar code:TTTCCTATCATGTTACAACTAA

Confirmation - LEAP-Seq

LEAP-Seq distance:166
LEAP-Seq percent confirming:20.0
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:8
LEAP-Seq n unique pos:10

Suggested primers for confirmation by PCR

Suggested primer 1:GGGTCAGAGGAGGTTTGACG
Suggested primer 2:GATATCCGCAATCGCCATGC