Insertion junction: CLIP2.058504_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.058504
Chromosome:chromosome 17
Location:6783670
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g746697 FAP249 Flagellar Associated Protein 249; (1 of 78) IPR002110//IPR020683 - Ankyrin repeat // Ankyrin repeat-containing domain 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CATCTTTGTCGACGTGTCCAACTGTCTATTTGCAACCTTGCGTCCATTCG
Internal bar code:GATTTTCCCCGATCGAATTTGT

Confirmation - LEAP-Seq

LEAP-Seq distance:564
LEAP-Seq percent confirming:90.0
LEAP-Seq n confirming:9
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:10

Suggested primers for confirmation by PCR

Suggested primer 1:TGCCAGTGTGTGTACGGTAC
Suggested primer 2:TACGTGAACCACACCTGAGC