Insertion junction: CLIP2.058508_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.058508
Chromosome:chromosome 11
Location:2510509
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g095104 (1 of 1) K15193 - protein SPT2 (SPTY2D1, SPT2) outside_mRNA

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACGGGAGGAGTTGGGCCGTGTTTAGGTTAGCTGGGGCTGCGGGGCTGCGG
Internal bar code:CTTTTATCTTAGTCGCTCGATC

Confirmation - LEAP-Seq

LEAP-Seq distance:1891
LEAP-Seq percent confirming:98.7952
LEAP-Seq n confirming:82
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:83

Suggested primers for confirmation by PCR

Suggested primer 1:TTGCTAGTCCACCAGTGCTG
Suggested primer 2:AGAGGGGCTAGCTGCTTTTG