Insertion junction: CLIP2.058520_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.058520
Chromosome:chromosome 17
Location:2574951
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g716150 SUMO90,SUM4 Similar to Small ubiquitin-like modifier; (1 of 4) PF03171//PF11976 - 2OG-Fe(II) oxygenase superfamily (2OG-FeII_Oxy) // Ubiquitin-2 like Rad60 SUMO-like (Rad60-SLD) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GATTGGGTGGTACGTGGAGGACAGTCCGTGCAGGCGGGTGGGAGGGGACA
Internal bar code:AACGCCTTACTCGCTGATGATA

Confirmation - LEAP-Seq

LEAP-Seq distance:2588
LEAP-Seq percent confirming:90.566
LEAP-Seq n confirming:48
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:53

Suggested primers for confirmation by PCR

Suggested primer 1:GGTGTAGCAGGATAGTCGGC
Suggested primer 2:TGTGGGGAAAGTCTTCGACG