Insertion junction: CLIP2.058525_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.058525
Chromosome:chromosome 12
Location:9505036
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g540450 gene_edge/mRNA_edge/5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACCCCAACCCGGTCACCGGTCCGGGAGGTTGTGTGCACGCCAGCATCCGC
Internal bar code:TCGTGGCGCGTGAAATCTTATG

Confirmation - LEAP-Seq

LEAP-Seq distance:1632
LEAP-Seq percent confirming:78.022
LEAP-Seq n confirming:71
LEAP-Seq n nonconfirming:20
LEAP-Seq n unique pos:91

Suggested primers for confirmation by PCR

Suggested primer 1:CCTGCATATTGGCGTTTCGG
Suggested primer 2:CGATTTCATCGCACAGGCTG