Insertion junction: CLIP2.058528_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.058528
Chromosome:plastome
Location:122487
Confidence (%):40
Locus systematic id Locus common name Defline Feature
CreCp.g802313 rbcL,ChreCp049,2717040 (1 of 1) K01601 - ribulose-bisphosphate carboxylase large chain (rbcL); RuBisCO large subunit CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCGTTTCCTTTTCGTTGCTGAAGCTATTTACAAAGCTCAAGCAGAAACAG
Internal bar code:CTCAAGATAGTTCCAGACATCA

Confirmation - LEAP-Seq

LEAP-Seq distance:3287
LEAP-Seq percent confirming:2.5641
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:38
LEAP-Seq n unique pos:39

Suggested primers for confirmation by PCR

Suggested primer 1:ACCGAACTGAAGACATGCGT
Suggested primer 2:TCGCTTATCCCCTGACAGGA