Insertion junction: CLIP2.058530_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.058530
Chromosome:chromosome 2
Location:6074986
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g119300 (1 of 1) PF14368 - Probable lipid transfer (LTP_2) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGAGGTACCCGCGGGTCTGCAGTTCGAGTGTTCCGGCTTGGCAATCTGG
Internal bar code:ACGTCAGGTCGAGTATGTCGCT

Confirmation - LEAP-Seq

LEAP-Seq distance:998
LEAP-Seq percent confirming:92.5926
LEAP-Seq n confirming:25
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:27

Suggested primers for confirmation by PCR

Suggested primer 1:ACCTGGATGTTGGACACGTC
Suggested primer 2:ATCCCACCTGCCTATCCACT