Insertion junction: CLIP2.058540_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.058540
Chromosome:chromosome 13
Location:2706770
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g581700 (1 of 6) 2.7.7.84 - 2'-5' oligoadenylate synthase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGCATGGCCAGATGGGCTGTGGTGAAGTACGGTGTAGGCGTTGCAGTACC
Internal bar code:GTTGATGTCTCGAAGCGAGAG

Confirmation - LEAP-Seq

LEAP-Seq distance:553
LEAP-Seq percent confirming:96.0
LEAP-Seq n confirming:24
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:25

Suggested primers for confirmation by PCR

Suggested primer 1:AGCGTGTGTTTACCGTACGT
Suggested primer 2:TTACATTGACACGCGGTGGA