Insertion junction: CLIP2.058547_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.058547
Chromosome:chromosome 1
Location:2383296
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g013600 outside_mRNA

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACTTTGGAGCATCCCGGCTGCGCACCAGTTAGCACCAGGTACCCAGCAGG
Internal bar code:ACAATAATCGAGGCTTGTTTCT

Confirmation - LEAP-Seq

LEAP-Seq distance:270
LEAP-Seq percent confirming:18.75
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:13
LEAP-Seq n unique pos:16

Suggested primers for confirmation by PCR

Suggested primer 1:GTGAGTCTGACACGTCTGCA
Suggested primer 2:CTGCTGCAATCACCGTATGC