Insertion junction: CLIP2.058553_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.058553
Chromosome:chromosome 7
Location:6262548
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g356600 (1 of 1) PF08007 - Cupin superfamily protein (Cupin_4) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGAAAGGGACCTGTCGCACCTCGCGGGAATCCTCGCTCTTCCTTCGGCGT
Internal bar code:GTCAAGGTGGTTAACTCGATAC

Confirmation - LEAP-Seq

LEAP-Seq distance:269
LEAP-Seq percent confirming:1.17647
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:84
LEAP-Seq n unique pos:85

Suggested primers for confirmation by PCR

Suggested primer 1:CAAGAAGGGCGGCAAGTAGA
Suggested primer 2:ACACTGCACACACAGACACA