Insertion junction: CLIP2.058556_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.058556
Chromosome:chromosome 16
Location:281614
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g694200 MMP15 Matrix-metalloproteinase-like protein; (1 of 40) 3.4.24.38 - Gametolysin / Lysin 3'UTR
Cre16.g694250 (1 of 18) PF12937 - F-box-like (F-box-like) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATCTGAACACACACTCTCAACATCAAGCCATGGCAAGTAACATCACATCA
Internal bar code:TTAGCCAGCGATCAGACAAGAT

Confirmation - LEAP-Seq

LEAP-Seq distance:227
LEAP-Seq percent confirming:50.0
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:2

Suggested primers for confirmation by PCR

Suggested primer 1:AATGCCCTTACTTGGTCCCG
Suggested primer 2:ACACGACATGCTGCAAAACC