Insertion junction: CLIP2.058560_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.058560
Chromosome:chromosome 4
Location:3092708
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre04.g225500 CSA6 (1 of 1) PF15066 - Cancer-associated gene protein 1 family (CAGE1); conserved protein of unknown function 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGAGTTCCGCCGGAGTTTTTCCTGAGTTTTGCTCTTAGATACCCTGAGTT
Internal bar code:TTTATTAGTGCCTGGCCGCTGT

Confirmation - LEAP-Seq

LEAP-Seq distance:3073
LEAP-Seq percent confirming:91.5493
LEAP-Seq n confirming:65
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:71

Suggested primers for confirmation by PCR

Suggested primer 1:CACGGACAGTTGGTGCTAGT
Suggested primer 2:GGTGAATGCCAGTAGGTGCT