Insertion junction: CLIP2.058563_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.058563
Chromosome:chromosome 3
Location:1812322
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g154150 (1 of 1) K12489 - Arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein (ACAP) 5'UTR
Cre03.g154200 (1 of 1) PTHR15970//PTHR15970:SF2 - FAMILY NOT NAMED // ELL-ASSOCIATED FACTOR EAF 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCTTTGGTTCGGACAAAAATACTAGCGATCAACAATTTCCAGTCTTATCG
Internal bar code:CGGATTTTACCACACCCCAAGT

Confirmation - LEAP-Seq

LEAP-Seq distance:2111
LEAP-Seq percent confirming:98.6111
LEAP-Seq n confirming:71
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:72

Suggested primers for confirmation by PCR

Suggested primer 1:TGTTTTGATGCTTGGCACGG
Suggested primer 2:ATCAAAGGCGCAACAAACCC