Insertion junction: CLIP2.058569_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.058569
Chromosome:chromosome 2
Location:1214197
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g081650 (1 of 1) PTHR31515//PTHR31515:SF3 - FAMILY NOT NAMED // GENOMIC DNA, CHROMOSOME 3, BAC CLONE: T19N8 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGATGGGACGAGCCTGGGATGGCGTCGAGGGTAGGGCTTGGCGTTTGTAG
Internal bar code:ATGGGGTATTGTTTACAGAAAG

Confirmation - LEAP-Seq

LEAP-Seq distance:1248
LEAP-Seq percent confirming:92.0
LEAP-Seq n confirming:46
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:50

Suggested primers for confirmation by PCR

Suggested primer 1:GCTCCAGTTTGTCGTGGGTA
Suggested primer 2:GTATGGCCTCGATACCCGTG