Insertion junction: CLIP2.058583_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.058583
Chromosome:chromosome 9
Location:1925247
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g397250 FAD5A Palmitate delta-7 desaturase; (1 of 2) K00507 - stearoyl-CoA desaturase (delta-9 desaturase) (SCD, desC) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATCTTCCACACAAACTGCAATTCCAATCTTCAACACACATCATCTGGGGA
Internal bar code:ATATCGACCTTAACCAATGCTC

Confirmation - LEAP-Seq

LEAP-Seq distance:2130
LEAP-Seq percent confirming:97.7778
LEAP-Seq n confirming:44
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:45

Suggested primers for confirmation by PCR

Suggested primer 1:TCTTGCAGACCAGCAGACTG
Suggested primer 2:CGGCTAGTAGAACGGCAGAG