Insertion junction: CLIP2.058589_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.058589
Chromosome:chromosome 2
Location:5272017
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre02.g112600 (1 of 3) PTHR13780//PTHR13780:SF49 - AMP-ACTIVATED PROTEIN KINASE, GAMMA REGULATORY SUBUNIT // SUBFAMILY NOT NAMED 3'UTR
Cre02.g112650 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACAATGTGTGTGTGCCCGGTATGGGGCAGGCATTGGTCCGTTGGGGGCTA
Internal bar code:GTTAGAGCCGGCGGTATTTGGT

Confirmation - LEAP-Seq

LEAP-Seq distance:617
LEAP-Seq percent confirming:20.0
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:GCTTGTGGCGACCAACATTT
Suggested primer 2:CCAGCTACCCTTCAAGGAGC