Insertion junction: CLIP2.058598_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.058598
Chromosome:chromosome 12
Location:5476587
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g801432 (1 of 2) PF00628//PF00665//PF09337 - PHD-finger (PHD) // Integrase core domain (rve) // His(2)-Cys(2) zinc finger (zf-H2C2) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CACGAGGGAGAGGGCTAGGGGGGCGAGCGCTGGGGGGGCAGTGGGCTTTG
Internal bar code:AAGTCTCCTGCCTCGATTTGGC

Confirmation - LEAP-Seq

LEAP-Seq distance:5739
LEAP-Seq percent confirming:43.6364
LEAP-Seq n confirming:24
LEAP-Seq n nonconfirming:31
LEAP-Seq n unique pos:55

Suggested primers for confirmation by PCR

Suggested primer 1:CCTGCACCCTACCTACTCCT
Suggested primer 2:CCAGGAGGCTAAGATGGTGC