Insertion junction: CLIP2.058602_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.058602
Chromosome:chromosome 14
Location:1825579
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre14.g619750 (1 of 781) IPR000104 - Antifreeze protein, type I 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCAGGTGGACATCAGGATGTGACACGCGCGCACACAAATCACACATGCG
Internal bar code:ACTGCAGGTACATCCGGGTGCG

Confirmation - LEAP-Seq

LEAP-Seq distance:2497
LEAP-Seq percent confirming:88.7097
LEAP-Seq n confirming:55
LEAP-Seq n nonconfirming:7
LEAP-Seq n unique pos:62

Suggested primers for confirmation by PCR

Suggested primer 1:ACCAGCAACGTTCCTGCATA
Suggested primer 2:CCCCTTCACCATGGCTTTCT