Insertion junction: CLIP2.058609_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.058609
Chromosome:chromosome 9
Location:3279423
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g395028 (1 of 2) PF02470 - MlaD protein (MlaD) 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCATCTATAGTCGTATAGCTCTATAGCCATACGCACTGCCTCCTCAAACT
Internal bar code:CACATTTATAAGGTGGTATGTA

Confirmation - LEAP-Seq

LEAP-Seq distance:1258
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:12
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:12

Suggested primers for confirmation by PCR

Suggested primer 1:GTTGATGCGCTGCTGTGAAG
Suggested primer 2:ATTTGGAAACAGCGCCACAC