Insertion junction: CLIP2.058615_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.058615
Chromosome:chromosome 17
Location:4856300
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre17.g734961 (1 of 1) PTHR15239:SF6 - NUCLEAR EXPORT MEDIATOR FACTOR NEMF intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCAGTGTGGCGTTGCGCGACATCGGTTTGTCACACCGCGGATCTCCCTTC
Internal bar code:TAACGCGGCGCTGTTGTGGTGA

Confirmation - LEAP-Seq

LEAP-Seq distance:733
LEAP-Seq percent confirming:55.5556
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:TGCTTTCGTGTTACGCTCCT
Suggested primer 2:GAGAGACTGGGTGTTGTGGG