Insertion junction: CLIP2.058616_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.058616
Chromosome:chromosome 15
Location:543341
Confidence (%):40
Locus systematic id Locus common name Defline Feature
Cre15.g636176 (1 of 10) IPR000104//IPR001810 - Antifreeze protein, type I // F-box domain CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGTGCGTCAGCTCGAGGGAGGTGAGGGCAGTGAGGAGAGCCAGGGTGGG
Internal bar code:TATTTGCGGGGCCCATTAGCTG

Confirmation - LEAP-Seq

LEAP-Seq distance:568
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:14
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:14

Suggested primers for confirmation by PCR

Suggested primer 1:CCGTTTTCCCGTGCCATTTT
Suggested primer 2:ACACATCCTCCTCCTCCTCC