Insertion junction: CLIP2.058621_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.058621
Chromosome:chromosome 11
Location:499532
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g467595 (1 of 18) PTHR10774 - EXTENDED SYNAPTOTAGMIN-RELATED 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AATCCTTTAAGCCACCGGGCGTTGCTCCACAAACTCAATCACGTCCACTC
Internal bar code:TTGAGACGACGCTTTGGGATTG

Confirmation - LEAP-Seq

LEAP-Seq distance:2587
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:46
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:46

Suggested primers for confirmation by PCR

Suggested primer 1:CCTACTGCGTCATCTCCGTC
Suggested primer 2:GCATCATGACGCTGCTGAAG