Insertion junction: CLIP2.058624_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.058624
Chromosome:chromosome 11
Location:540687
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g467598 (1 of 1) IPR000104//IPR013763 - Antifreeze protein, type I // Cyclin-like 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAAACCCTTTCCGCCCCCGCTATAATCGATCTACATACCCTTCCCACCCG
Internal bar code:TAAGCGCTGTCTGGCCTGGAGC

Confirmation - LEAP-Seq

LEAP-Seq distance:1979
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:66
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:66

Suggested primers for confirmation by PCR

Suggested primer 1:TGCAGGGCGTTGAGATTGAT
Suggested primer 2:CATCGGAACTGCGCATTCTG