Insertion junction: CLIP2.058624_3

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.058624
Chromosome:chromosome 11
Location:540697
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g467598 (1 of 1) IPR000104//IPR013763 - Antifreeze protein, type I // Cyclin-like 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTACACGATGGCGGTACAGGCATGAGGAGACGTGCGTAGTGTTCATCAGG
Internal bar code:CGTGGAAAATGTGGGGGGCTCT

Confirmation - LEAP-Seq

LEAP-Seq distance:2123
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:39
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:39

Suggested primers for confirmation by PCR

Suggested primer 1:CATCGGAACTGCGCATTCTG
Suggested primer 2:TGCAGGGCGTTGAGATTGAT