Insertion junction: CLIP2.058626_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.058626
Chromosome:chromosome 3
Location:7450712
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g205850 MAE6,MFT6 MATE efflux family protein; (1 of 3) PTHR11206//PTHR11206:SF95 - MULTIDRUG RESISTANCE PROTEIN // MULTI ANTIMICROBIAL EXTRUSION FAMILY PROTEIN 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGCCCATCATGAACGTAAACAATGAGGCAAGAACGTAATGTGCTAGCGCT
Internal bar code:TTTGTTGGAGCTCTCGGAGAGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1097
LEAP-Seq percent confirming:88.4615
LEAP-Seq n confirming:46
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:52

Suggested primers for confirmation by PCR

Suggested primer 1:CTACTAGACGACGGTTCCGC
Suggested primer 2:GGTGGTGCACAGAAAAGCAG