Insertion junction: CLIP2.058633_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.058633
Chromosome:chromosome 15
Location:5252600
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g734677 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGATCGCCAGCCTAGCCCCACCACCACGCGTGGCCTCCCAGGGCAACAGC
Internal bar code:CTTTGACCGACGAAGCTTAGTG

Confirmation - LEAP-Seq

LEAP-Seq distance:2828
LEAP-Seq percent confirming:1.17647
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:84
LEAP-Seq n unique pos:85

Suggested primers for confirmation by PCR

Suggested primer 1:GAGCTGTACGCGGAGATTGA
Suggested primer 2:AGCTCACTGTCGATTGGGTG