Insertion junction: CLIP2.058638_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.058638
Chromosome:chromosome 13
Location:747445
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g566650 LCS2 Long-chain acyl-CoA synthetase; (1 of 1) 2.7.8.11//6.2.1.3 - CDP-diacylglycerol--inositol 3-phosphatidyltransferase / Phosphatidylinositol synthase // Long-chain-fatty-acid--CoA ligase / Lignoceroyl-CoA synthase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTCCGAAGGATTCGTATGCCGCTGCGTGCTGGATTTGTTGCAAGAGACTG
Internal bar code:ACAGCATTAGGCTACTAGTAAT

Confirmation - LEAP-Seq

LEAP-Seq distance:2130
LEAP-Seq percent confirming:98.5507
LEAP-Seq n confirming:68
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:69

Suggested primers for confirmation by PCR

Suggested primer 1:GATACCCCCAACACGAAGCA
Suggested primer 2:TAACGCAATCCCTTCCCCAC