Insertion junction: CLIP2.058641_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.058641
Chromosome:chromosome 14
Location:3749210
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre14.g631750 BLZ12 bZIP transcription factor; (1 of 10) PF00170 - bZIP transcription factor (bZIP_1) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTCGTTACCACGCCCAAGGGTCCCTGTCACAATGTCACACAGTCGGCCTA
Internal bar code:ACTAATGAAGCGAAAAGGAAAG

Confirmation - LEAP-Seq

LEAP-Seq distance:4292
LEAP-Seq percent confirming:97.0
LEAP-Seq n confirming:97
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:100

Suggested primers for confirmation by PCR

Suggested primer 1:ACAACGAGTGTCTGCTGAGG
Suggested primer 2:TTCAACGCATCCCATCGACA