Insertion junction: CLIP2.058642_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.058642
Chromosome:chromosome 13
Location:1456062
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g572200 (1 of 1) K03834 - tyrosine-specific transport protein (tyrP) 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCCACCTGAGCGCCAACGCAAACAGCGACTCCTCCAGCTTGGTTTATTGT
Internal bar code:CAGTGGTGCAATAGACTGCGCA

Confirmation - LEAP-Seq

LEAP-Seq distance:1052
LEAP-Seq percent confirming:93.75
LEAP-Seq n confirming:30
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:32

Suggested primers for confirmation by PCR

Suggested primer 1:CAGCAAACACATCCACAGCC
Suggested primer 2:GAGCTGAGGGTGTCGCTATC