Insertion junction: CLIP2.058643_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.058643
Chromosome:chromosome 10
Location:1306336
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g427200 (1 of 781) IPR000104 - Antifreeze protein, type I 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCGATGTAACACATCATCGGCATACCAAGCGTGAAGTGTCGAATGCGGA
Internal bar code:GTCCTGGATCTCAAAAAGGACA

Confirmation - LEAP-Seq

LEAP-Seq distance:5138
LEAP-Seq percent confirming:97.3333
LEAP-Seq n confirming:73
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:75

Suggested primers for confirmation by PCR

Suggested primer 1:CAGCAACAAACTTCCTGGCC
Suggested primer 2:GAGGCAATGCGCTAACATGG