Insertion junction: CLIP2.058646_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.058646
Chromosome:chromosome 10
Location:1232459
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g426350 predicted protein; (1 of 2) 5.2.1.14 - Beta-carotene isomerase 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATCGCTGCCCCAACCTGGATACTGTAACCATACGTCTTTATTGACATCAA
Internal bar code:TAGGGACGCATATTGTACGATT

Confirmation - LEAP-Seq

LEAP-Seq distance:4103
LEAP-Seq percent confirming:98.8095
LEAP-Seq n confirming:83
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:84

Suggested primers for confirmation by PCR

Suggested primer 1:ATGCATCCAGTGAACTGCGA
Suggested primer 2:CACGTCCCTCGATACCCATG