Insertion junction: CLIP2.058649_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.058649
Chromosome:chromosome 1
Location:2101598
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre01.g011750 (1 of 1) PTHR31353:SF1 - PROTEIN TAG-322 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCAGAGCGAGCGCCGCGTGTCGCGAACTGCGAGGTGGCTGCATGTTGGCT
Internal bar code:ACAACATTGCGGGTGAGGTGAA

Confirmation - LEAP-Seq

LEAP-Seq distance:276
LEAP-Seq percent confirming:55.0
LEAP-Seq n confirming:11
LEAP-Seq n nonconfirming:9
LEAP-Seq n unique pos:20

Suggested primers for confirmation by PCR

Suggested primer 1:TCTTGCTGAATTCCTGGCGT
Suggested primer 2:AAGCAGCAAGGAGACAGGAC