Insertion junction: CLIP2.058654_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.058654
Chromosome:chromosome 16
Location:693959
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g691400 (1 of 102) PF01753 - MYND finger (zf-MYND) 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCGAGGGCGAGCCGGAGGCTGCGCAGAACCGGGTCCGGTTGAGTGCTTG
Internal bar code:TTGAAGTTAGTTTTGGTATCCG

Confirmation - LEAP-Seq

LEAP-Seq distance:3253
LEAP-Seq percent confirming:59.4595
LEAP-Seq n confirming:44
LEAP-Seq n nonconfirming:30
LEAP-Seq n unique pos:74

Suggested primers for confirmation by PCR

Suggested primer 1:TTGGTCCGTGTTCTGAGCTC
Suggested primer 2:GGACCTCTCCCTTCATCCCT