Insertion junction: CLIP2.058658_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.058658
Chromosome:chromosome 6
Location:374568
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre06.g251500 SPS1 (1 of 1) K18787 - thermospermine synthase (ACL5); Spermine synthase CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGTGCGCGCGTCGTCGTTGATGAGCGTGAGGCGCGGGTCGGCGAAGGCCT
Internal bar code:TTACAGGGGTGGGATGTCAGTG

Confirmation - LEAP-Seq

LEAP-Seq distance:567
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:20
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:20

Suggested primers for confirmation by PCR

Suggested primer 1:TGAACCCATGGGCACTTGTT
Suggested primer 2:TTGGCTTCCACTTGGGGTTT