Insertion junction: CLIP2.058662_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.058662
Chromosome:chromosome 9
Location:1593265
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g398800 CSB36,TNP23 (1 of 70) PF07282 - Putative transposase DNA-binding domain (OrfB_Zn_ribbon); {"Probable transposon-derived protein of Chlamydomonas-Specific family B 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTTTGTTAGCTGCGGGTTAGCACGGACTGTGCACCCCACCCAACCGGCCA
Internal bar code:TTTTTTCTTATTATGGACGGGT

Confirmation - LEAP-Seq

LEAP-Seq distance:2876
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:25
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:25

Suggested primers for confirmation by PCR

Suggested primer 1:CCATCCCAACGGACAGAACA
Suggested primer 2:ATGACTGCTTGACGACCTGG